Transcript: USP46-AS1:7

Basic information

LNCipedia transcript ID: USP46-AS1:7 
LNCipedia gene ID: USP46-AS1
Location (hg19): chr4:53525606-53527835
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1015 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000248866.1|ENST00000503051.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -64.3731 non-coding 
CPAT coding probability 3.23% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
USP46-AS1:7 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 USP46-AS1:7
5.0 USP46-AS1:7
5.1 USP46-AS1:7
5.2 USP46-AS1:7