Transcript: VWC2L-IT1:1

Basic information

LNCipedia transcript ID: VWC2L-IT1:1 
LNCipedia gene ID: VWC2L-IT1
Location (hg19): chr2:215374906-215401613
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 480 bp
Exons: 4
Sources: NONCODE v4; Refseq - Dec 2014
Alternative transcript names: NONHSAT076724; NR_047698
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -251.4543 non-coding 
CPAT coding probability 0.44% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
VWC2L-IT1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-SPAG16-2:2
4.0 VWC2L-IT1:1
4.1 VWC2L-IT1:1
5.0 VWC2L-IT1:1
5.1 VWC2L-IT1:1
5.2 VWC2L-IT1:1