Transcript: WASIR2:1

Basic information

LNCipedia transcript ID: WASIR2:1 
LNCipedia gene ID: WASIR2
Location (hg19): chr16:72797-75098
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1142 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT051728
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 134.2907 coding 
CPAT coding probability 7.33% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
WASIR2:1 no no no no

Available literature

  1. Daniels (2001), Sequence, structure and pathology of the fully annotated terminal 2 Mb of the short arm of human chromosome 16., Hum. Mol. Genet.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-SNRNP25-1:4
4.0 WASIR2:1
4.1 WASIR2:1
5.0 WASIR2:1
5.1 WASIR2:1
5.2 WASIR2:1