Transcript: WASIR2:2

Basic information

LNCipedia transcript ID: WASIR2:2 
LNCipedia gene ID: WASIR2
Location (hg19): chr16:72891-75033
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1108 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT051729
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 71.622 coding 
CPAT coding probability 7.34% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
WASIR2:2 no no no no

Available literature

  1. Daniels (2001), Sequence, structure and pathology of the fully annotated terminal 2 Mb of the short arm of human chromosome 16., Hum. Mol. Genet.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-SNRNP25-1:5
4.0 WASIR2:2
4.1 WASIR2:2
5.0 WASIR2:2
5.1 WASIR2:2
5.2 WASIR2:2