Transcript: WASIR2:6

Basic information

LNCipedia transcript ID: WASIR2:6 
LNCipedia gene ID: WASIR2
RefSeq ID: NR_130735
Location (hg19): chr16:72916-75114
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1039 bp
Exons: 2
Sources: Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_130735.1
Alternative gene names: WASIR2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 75.5881 coding 
CPAT coding probability 3.83% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
WASIR2:6 no no no no

Available literature

  1. Daniels (2001), Sequence, structure and pathology of the fully annotated terminal 2 Mb of the short arm of human chromosome 16., Hum. Mol. Genet.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 WASIR2:6
5.1 WASIR2:6
5.2 WASIR2:6