Transcript: WDFY3-AS2:26

Basic information

LNCipedia transcript ID: WDFY3-AS2:26 
LNCipedia gene ID: WDFY3-AS2
Location (hg19): chr4:85887952-85948199
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 783 bp
Exons: 5
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000180769.4|HBMT00001066049.1
Alternative gene names: FBI4


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -41.5973 non-coding 
CPAT coding probability 0.34% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
WDFY3-AS2:26 no no no no

Available literature

  1. Kehrer-Sawatzki (2005), Breakpoint analysis of the pericentric inversion distinguishing human chromosome 4 from the homologous chromosome in the chimpanzee (Pan troglodytes)., Hum. Mutat.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 WDFY3-AS2:26
5.0 WDFY3-AS2:26
5.1 WDFY3-AS2:26
5.2 WDFY3-AS2:26