Transcript: WDFY3-AS2:8

Basic information

LNCipedia transcript ID: WDFY3-AS2:8 
LNCipedia gene ID: WDFY3-AS2
RefSeq ID: NR_015359
Location (hg19): chr4:85887971-85928168
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1569 bp
Exons: 4
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_015359; NR_015359.1
Alternative gene names: FBI4; WDFY3-AS2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -41.5973 non-coding 
CPAT coding probability 0.58% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
WDFY3-AS2:8 no no no no

Available literature

  1. Kehrer-Sawatzki (2005), Breakpoint analysis of the pericentric inversion distinguishing human chromosome 4 from the homologous chromosome in the chimpanzee (Pan troglodytes)., Hum. Mutat.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CDS1-2:6
4.0 WDFY3-AS2:8
4.1 WDFY3-AS2:8
5.0 WDFY3-AS2:8
5.1 WDFY3-AS2:8
5.2 WDFY3-AS2:8