Transcript: XIRP2-AS1:2

Basic information

LNCipedia transcript ID: XIRP2-AS1:2 
LNCipedia gene ID: XIRP2-AS1
RefSeq ID: NR_046665
Location (hg19): chr2:167979319-167997465
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1871 bp
Exons: 2
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_046665; NR_046665.1
Alternative gene names: ; XIRP2-AS1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -165.8251 non-coding 
CPAT coding probability 0.61% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
XIRP2-AS1:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-SCN7A-1:2
4.0 XIRP2-AS1:2
4.1 XIRP2-AS1:2
5.0 XIRP2-AS1:2
5.1 XIRP2-AS1:2
5.2 XIRP2-AS1:2