Transcript: XXYLT1-AS2:2

Basic information

LNCipedia transcript ID: XXYLT1-AS2:2 
LNCipedia gene ID: XXYLT1-AS2
RefSeq ID: NR_102711
Location (hg19): chr3:194868600-194873585
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 835 bp
Exons: 2
Sources: NONCODE v4; Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NONHSAT094144; NR_102711; NR_102711.1
Alternative gene names: ; XXYLT1-AS2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -89.5858 non-coding 
CPAT coding probability 3.22% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
XXYLT1-AS2:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-FAM43A-11:3
4.0 XXYLT1-AS2:2
4.1 XXYLT1-AS2:2
5.0 XXYLT1-AS2:2
5.1 XXYLT1-AS2:2
5.2 XXYLT1-AS2:2