Transcript: ZBTB20-AS1:8

Basic information

LNCipedia transcript ID: ZBTB20-AS1:8 
HGNC Gene Symbol: ZBTB20-AS1    
HGNC Full Gene Name: ZBTB20 antisense RNA 1
Ensembl Gene ID: ENSG00000241560
Ensembl Transcript ID: ENST00000487814
Location (hg19): chr3:114106516-114107825
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 690 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000487814.1; ZBTB20-AS1-005; OTTHUMT00000354973.1; NONHSAT091284
Alternative gene names: ENSG00000241560.1; ZBTB20-AS1; OTTHUMG00000159368.1; ENSG00000241560.5;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -261.5162 non-coding 
CPAT coding probability 2.67% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
ZBTB20-AS1:8 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-TIGIT-2:5
4.0 ZBTB20-AS1:8
4.1 ZBTB20-AS1:8
5.0 ZBTB20-AS1:8
5.1 ZBTB20-AS1:8
5.2 ZBTB20-AS1:8