Transcript: ZBTB46-AS1:1

Basic information

LNCipedia transcript ID: ZBTB46-AS1:1 
HGNC Gene Symbol: ZBTB46-AS1    
HGNC Full Gene Name: ZBTB46 antisense RNA 1
Ensembl Gene ID: ENSG00000231208
Ensembl Transcript ID: ENST00000435912
Location (hg19): chr20:62439429-62447874
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 533 bp
Exons: 3
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000435912.1; RP4-583P15.11-001; OTTHUMT00000080171.1; NONHSAT080940
Alternative gene names: ENSG00000231208.2; RP4-583P15.11; OTTHUMG00000032990.1; ENSG00000231208.4; ZBTB46-AS1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 13.8016 non-coding 
CPAT coding probability 10.68% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
ZBTB46-AS1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ABHD16B-1:1
4.0 ZBTB46-AS1:1
4.1 ZBTB46-AS1:1
5.0 ZBTB46-AS1:1
5.1 ZBTB46-AS1:1
5.2 ZBTB46-AS1:1