Transcript: ZFHX2-AS1:40

Basic information

LNCipedia transcript ID: ZFHX2-AS1:40 
LNCipedia gene ID: ZFHX2-AS1
Location (hg19): chr14:23982778-23983631
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 647 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT035911
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -253.6356 non-coding 
CPAT coding probability 4.79% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
ZFHX2-AS1:40 no no no no

Available literature

  1. Komine (2006), Novel transcription factor zfh-5 is negatively regulated by its own antisense RNA in mouse brain., Mol. Cell. Neurosci.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-THTPA-2:12
4.0 lnc-THTPA-2:12
4.1 lnc-THTPA-2:12
5.0 lnc-THTPA-2:12
5.1 ZFHX2-AS1:18
5.2 ZFHX2-AS1:40