Transcript: ZFPM2-AS1:5

Basic information

LNCipedia transcript ID: ZFPM2-AS1:5 
HGNC Gene Symbol: ZFPM2-AS1    
HGNC Full Gene Name: ZFPM2 antisense RNA 1
Ensembl Gene ID: ENSG00000251003
Ensembl Transcript ID: ENST00000521622
Location (hg19): chr8:106810555-107072719
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 394 bp
Exons: 4
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000521622.1; RP11-152P17.2-002; OTTHUMT00000380629.1; NONHSAT128242
Alternative gene names: ENSG00000251003.2; RP11-152P17.2; OTTHUMG00000164861.1; ENSG00000251003.3; ENSG00000251003.7; ZFPM2-AS1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -47.733 non-coding 
CPAT coding probability 2.73% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
ZFPM2-AS1:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RP11-778D12.2.1-4:2
4.0 ZFPM2-AS1:5
4.1 ZFPM2-AS1:5
5.0 ZFPM2-AS1:5
5.1 ZFPM2-AS1:5
5.2 ZFPM2-AS1:5