Transcript: ZIM2-AS1:7

Basic information

LNCipedia transcript ID: ZIM2-AS1:7 
LNCipedia gene ID: ZIM2-AS1
Location (hg19): chr19:57302421-57309662
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 557 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT068192
Alternative gene names: ZIM2as


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 5.1052 non-coding 
CPAT coding probability 0.27% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
ZIM2-AS1:7 no no no no

Available literature

  1. Huang (2009), Identification of an antisense transcript to ZIM2 in the primate lineage., Gene


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ZNF71-6:6
4.0 ZIM2-AS1:7
4.1 ZIM2-AS1:7
5.0 ZIM2-AS1:7
5.1 ZIM2-AS1:7
5.2 ZIM2-AS1:7