Transcript: ZNF337-AS1:9

Basic information

LNCipedia transcript ID: ZNF337-AS1:9 
HGNC Gene Symbol: ZNF337-AS1    
HGNC Full Gene Name: ZNF337 antisense RNA 1
Ensembl Gene ID: ENSG00000213742
Ensembl Transcript ID: ENST00000420803
Location (hg19): chr20:25604869-25650980
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 780 bp
Exons: 5
Sources: Gencode v13; Ensembl release 68 - Jul 2012; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000420803.1; RP4-694B14.5-003; OTTHUMT00000078449.1; ENST00000420803.5
Alternative gene names: ENSG00000213742.2; RP4-694B14.5; OTTHUMG00000032129.1; ZNF337-AS1; ENSG00000213742.6;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -47.872 non-coding 
CPAT coding probability 6.71% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
ZNF337-AS1:9 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-GINS1-1:5
4.0 ZNF337-AS1:9
4.1 ZNF337-AS1:9
5.0 ZNF337-AS1:9
5.1 ZNF337-AS1:9
5.2 ZNF337-AS1:9