Transcript: ZNF341-AS1:4

Basic information

LNCipedia transcript ID: ZNF341-AS1:4 
HGNC Gene Symbol: ZNF341-AS1    
HGNC Full Gene Name: ZNF341 antisense RNA 1
Ensembl Gene ID: ENSG00000230753
Ensembl Transcript ID: ENST00000423074
Location (hg19): chr20:32375179-32380833
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 464 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000423074.1; RP4-553F4.6-002; OTTHUMT00000078745.2; NONHSAT079406
Alternative gene names: ENSG00000230753.1; RP4-553F4.6; OTTHUMG00000032278.2; ENSG00000230753.5; ZNF341-AS1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -125.4846 non-coding 
CPAT coding probability 2.93% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
ZNF341-AS1:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-PXMP4-2:3
4.0 ZNF341-AS1:4
4.1 ZNF341-AS1:4
5.0 ZNF341-AS1:4
5.1 ZNF341-AS1:4
5.2 ZNF341-AS1:4