Transcript: ZNF385D-AS2:1

Basic information

LNCipedia transcript ID: ZNF385D-AS2:1 
HGNC Gene Symbol: ZNF385D-AS2    
HGNC Full Gene Name: ZNF385D antisense RNA 2
Ensembl Gene ID: ENSG00000223351
Ensembl Transcript ID: ENST00000448980
Location (hg19): chr3:21984058-22003032
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 370 bp
Exons: 4
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000448980; ENST00000448980.1; ZNF385D-AS2-001; OTTHUMT00000340782.2; NONHSAT088651; ENST00000448980.5
Alternative gene names: ENSG00000223351; ZNF385D-AS2; ENSG00000223351.1; OTTHUMG00000155585.2; ENSG00000223351.5;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -47.8487 non-coding 
CPAT coding probability 1.02% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
ZNF385D-AS2:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-UBE2E2-2:1
3.1 lnc-UBE2E2-2:1
4.0 ZNF385D-AS2:1
4.1 ZNF385D-AS2:1
5.0 ZNF385D-AS2:1
5.1 ZNF385D-AS2:1
5.2 ZNF385D-AS2:1