Transcript: ZNF433-AS1:25

Basic information

LNCipedia transcript ID: ZNF433-AS1:25 
HGNC Gene Symbol: ZNF433-AS1    
HGNC Full Gene Name: ZNF433 and ZNF878 antisense RNA 1
Ensembl Gene ID: ENSG00000219665
Ensembl Transcript ID: ENST00000406892
RefSeq ID: NR_134927
Location (hg19): chr19:12098432-12138009
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1257 bp
Exons: 3
Sources: Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018; Refseq - NCBI Annotation Release 106
Alternative transcript names: ENST00000406892.2; ENST00000406892.6; NR_134927.1
Alternative gene names: ENSG00000219665.4; CTD-2006C1.2; ENSG00000219665.8; AC008770.1; LOC101928464; ZNF433-AS1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 15.3369 non-coding 
CPAT coding probability 55.18% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
ZNF433-AS1:25 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CTD-2006C1.2.1-1:2
4.0 lnc-CTD-2006C1.2.1-1:2
4.1 lnc-CTD-2006C1.2.1-1:2
5.0 lnc-CTD-2006C1.2.1-1:2
5.1 ZNF433-AS1:3
5.2 ZNF433-AS1:25