Transcript: ZNF436-AS1:10

Basic information

LNCipedia transcript ID: ZNF436-AS1:10 
LNCipedia gene ID: ZNF436-AS1
RefSeq ID: NR_033691
Location (hg19): chr1:23695711-23698332
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 694 bp
Exons: 3
Sources: Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_033691.1
Alternative gene names: ZNF436-AS1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -184.4865 non-coding 
CPAT coding probability 10.98% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
ZNF436-AS1:10 yes no no no

Available literature

  1. Strausberg (2002), Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences., Proc. Natl. Acad. Sci. U.S.A.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 ZNF436-AS1:10
5.1 ZNF436-AS1:10
5.2 ZNF436-AS1:10