Transcript: ZNF451-AS1:26

Basic information

LNCipedia transcript ID: ZNF451-AS1:26 
HGNC Gene Symbol: ZNF451-AS1    
HGNC Full Gene Name: ZNF451 regulatory antisense RNA 1
Ensembl Gene ID: ENSG00000226803
Ensembl Transcript ID: ENST00000585414
Location (hg19): chr6:57035803-57039034
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 699 bp
Exons: 3
Sources: NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: NONHSAT113286; ENST00000585414.1
Alternative gene names: ENSG00000226803.3; RP11-203B9.4; ENSG00000226803.7; AL136311.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -238.0487 non-coding 
CPAT coding probability 2.52% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
ZNF451-AS1:26 yes no no no

Available literature

  1. Zhang (2018), LncRNA BC032020 suppresses the survival of human pancreatic ductal adenocarcinoma cells by targeting ZNF451., Int. J. Oncol.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RAB23-2:2
4.0 lnc-RAB23-2:2
4.1 lnc-RAB23-2:2
5.0 lnc-RAB23-2:2
5.1 ZNF451-AS1:2
5.2 ZNF451-AS1:26