Transcript: ZNF503-AS1:5

Basic information

LNCipedia transcript ID: ZNF503-AS1:5 
LNCipedia gene ID: ZNF503-AS1
RefSeq ID: NR_038223
Location (hg19): chr10:77056141-77121436
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1867 bp
Exons: 3
Sources: NONCODE v4; Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NONHSAT014097; NR_038223; NR_038223.1
Alternative gene names: ; ZNF503-AS1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -127.7458 non-coding 
CPAT coding probability 4.45% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
ZNF503-AS1:5 no no no no

Available literature

  1. Chen (2017), LncRNA ZNF503-AS1 promotes RPE differentiation by downregulating ZNF503 expression., Cell Death Dis


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-VDAC2-1:8
4.0 ZNF503-AS1:5
4.1 ZNF503-AS1:5
5.0 ZNF503-AS1:5
5.1 ZNF503-AS1:5
5.2 ZNF503-AS1:5