Transcript: ZNF571-AS1:2

Basic information

LNCipedia transcript ID: ZNF571-AS1:2 
LNCipedia gene ID: ZNF571-AS1
Location (hg19): chr19:38039797-38041220
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 739 bp
Exons: 3
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00027537; NONHSAT066130
Alternative gene names: XLOC_013064; linc-ZNF540;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -7.2826 non-coding 
CPAT coding probability 4.95% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
ZNF571-AS1:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-ZNF793-1:2
3.1 lnc-ZNF793-1:2
4.0 ZNF571-AS1:2
4.1 ZNF571-AS1:2
5.0 ZNF571-AS1:2
5.1 ZNF571-AS1:2
5.2 ZNF571-AS1:2