Transcript: lnc-AAAS-1:2

Basic information

LNCipedia transcript ID: lnc-AAAS-1:2 
LNCipedia gene ID: lnc-AAAS-1
Ensembl Gene ID: ENSG00000257605
Ensembl Transcript ID: ENST00000550263
Location (hg19): chr12:53692439-53694098
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 647 bp
Exons: 2
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000550263.2
Alternative gene names: ENSG00000257605.2; RP11-680A11.5; AC073611.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 139.0192 coding 
CPAT coding probability 16.89% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-AAAS-1:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-AAAS-1:2
4.1 lnc-AAAS-1:2
5.0 lnc-AAAS-1:2
5.1 lnc-SP7-5:3
5.2 lnc-AAAS-1:2