Transcript: lnc-AAGAB-1:24

Basic information

LNCipedia transcript ID: lnc-AAGAB-1:24 
LNCipedia gene ID: lnc-AAGAB-1
Location (hg19): chr15:67348706-67357777
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1927 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000259347.1|ENCT00000150388.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -111.9315 non-coding 
CPAT coding probability 1.85% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-AAGAB-1:24 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-RP11-342M21.2.1-1:19
5.0 lnc-RP11-342M21.2.1-1:19
5.1 lnc-AAGAB-1:2
5.2 lnc-AAGAB-1:24