Transcript: lnc-AARD-1:1

Basic information

LNCipedia transcript ID: lnc-AARD-1:1 
LNCipedia gene ID: lnc-AARD-1
Ensembl Gene ID: ENSG00000253622
Ensembl Transcript ID: ENST00000518439
Location (hg19): chr8:118140694-118142538
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 497 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000518439.1; RP11-654G14.1-001; OTTHUMT00000381207.1; NONHSAT128391
Alternative gene names: ENSG00000253622.1; RP11-654G14.1; OTTHUMG00000164964.1; AC027419.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -207.252 non-coding 
CPAT coding probability 1.34% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-AARD-1:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-C8orf85-1:1
4.0 lnc-C8orf85-1:1
4.1 lnc-C8orf85-1:1
5.0 lnc-C8orf85-1:1
5.1 lnc-COLEC10-5:1
5.2 lnc-AARD-1:1