Transcript: lnc-AARS2-4:2

Basic information

LNCipedia transcript ID: lnc-AARS2-4:2 
LNCipedia gene ID: lnc-AARS2-4
Location (hg19): chr6:44354681-44355656
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 976 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000088373.1|FTMT22200003546.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -109.2121 non-coding 
CPAT coding probability 0.05% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-AARS2-4:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-AARS2-4:2
5.0 lnc-AARS2-4:2
5.1 lnc-NFKBIE-4:6
5.2 lnc-AARS2-4:2