Transcript: lnc-ABCA13-3:1

Basic information

LNCipedia transcript ID: lnc-ABCA13-3:1 
LNCipedia gene ID: lnc-ABCA13-3
Location (hg19): chr7:48854078-48855837
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 653 bp
Exons: 2
Sources: Nielsen et al.,2014
Alternative transcript names: l_3412_chr7:48854077-48855837_testes
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -144.274 non-coding 
CPAT coding probability 0.52% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ABCA13-3:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ABCA13-3:1
4.0 lnc-ABCA13-3:1
4.1 lnc-ABCA13-3:1
5.0 lnc-ABCA13-3:1
5.1 lnc-CCT6A-98:1
5.2 lnc-ABCA13-3:1