Transcript: lnc-ABCA5-7:2

Basic information

LNCipedia transcript ID: lnc-ABCA5-7:2 
LNCipedia gene ID: lnc-ABCA5-7
Location (hg19): chr17:67529587-67533733
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 381 bp
Exons: 3
Sources: NONCODE v4
Alternative transcript names: NONHSAT055583
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -201.3288 non-coding 
CPAT coding probability 0.23% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ABCA5-7:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ABCA5-7:2
4.0 lnc-ABCA5-7:2
4.1 lnc-ABCA5-7:2
5.0 lnc-ABCA5-7:2
5.1 lnc-GRB2-71:2
5.2 lnc-ABCA5-7:2