Transcript: lnc-ABCB1-2:6

Basic information

LNCipedia transcript ID: lnc-ABCB1-2:6 
LNCipedia gene ID: lnc-ABCB1-2
Location (hg19): chr7:87229434-87342570
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 271 bp
Exons: 3
Sources: NONCODE v4
Alternative transcript names: NONHSAT121836
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -173.2035 non-coding 
CPAT coding probability 15.88% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ABCB1-2:6 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ABCB4-2:5
4.0 lnc-ABCB1-2:6
4.1 lnc-ABCB1-2:6
5.0 lnc-ABCB1-2:6
5.1 lnc-PEX1-58:3
5.2 lnc-ABCB1-2:6