Transcript: lnc-ABCC2-2:1

Basic information

LNCipedia transcript ID: lnc-ABCC2-2:1 
LNCipedia gene ID: lnc-ABCC2-2
Location (hg19): chr10:101676956-101708745
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2651 bp
Exons: 5
Sources: Nielsen et al.,2014
Alternative transcript names: refGeneNc_243_NR_024130
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -36.6104 non-coding 
CPAT coding probability 2.18% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ABCC2-2:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ABCC2-2:1
4.0 lnc-ABCC2-2:1
4.1 lnc-ABCC2-2:1
5.0 lnc-ABCC2-2:1
5.1 lnc-SMC3-159:1
5.2 lnc-ABCC2-2:1