Transcript: lnc-ABCD3-2:6

Basic information

LNCipedia transcript ID: lnc-ABCD3-2:6 
LNCipedia gene ID: lnc-ABCD3-2
Location (hg19): chr1:94723546-94800394
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 468 bp
Exons: 3
Sources: NONCODE v4
Alternative transcript names: NONHSAT004580
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -185.9105 non-coding 
CPAT coding probability 1.34% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ABCD3-2:6 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ABCD3-2:6
4.0 lnc-ABCD3-2:6
4.1 lnc-ABCD3-2:6
5.0 lnc-ABCD3-2:6
5.1 lnc-BTBD8-34:9
5.2 lnc-ABCD3-2:6