Transcript: lnc-ABHD12-4:1

Basic information

LNCipedia transcript ID: lnc-ABHD12-4:1 
LNCipedia gene ID: lnc-ABHD12-4
RefSeq ID: NR_109994
Location (hg19): chr20:25165308-25177528
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2180 bp
Exons: 6
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_109994; NR_109994.1
Alternative gene names: LOC101926889


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 21.4588 non-coding 
CPAT coding probability 16.38% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ABHD12-4:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ABHD12-4:1
4.0 lnc-ABHD12-4:1
4.1 lnc-ABHD12-4:1
5.0 lnc-ABHD12-4:1
5.1 lnc-CST4-47:1
5.2 lnc-ABHD12-4:1