Transcript: lnc-ABHD4-4:1

Basic information

LNCipedia transcript ID: lnc-ABHD4-4:1 
LNCipedia gene ID: lnc-ABHD4-4
Location (hg19): chr14:22886826-22887645
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 455 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014
Alternative transcript names: ENST00000555460.1; AE000661.50-001; OTTHUMT00000410668.1; NONHSAT035770
Alternative gene names: ENSG00000259042.1; AE000661.50; OTTHUMG00000170842.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -366.3657 non-coding 
CPAT coding probability 2.56% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ABHD4-4:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AE000662.92.1-2:1
4.0 lnc-AE000662.92.1-2:1
4.1 lnc-AE000662.92.1-2:1
5.0 lnc-AE000662.92.1-2:1
5.1 lnc-RNF212B-14:1
5.2 lnc-ABHD4-4:1