Transcript: lnc-ABO-1:2

Basic information

LNCipedia transcript ID: lnc-ABO-1:2 
LNCipedia gene ID: lnc-ABO-1
Location (hg19): chr9:136153502-136154268
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 415 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000175164.9|FTMT23300024361.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -4.0453 non-coding 
CPAT coding probability 1.24% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ABO-1:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-OBP2B-1:12
5.0 lnc-OBP2B-1:12
5.1 lnc-ABO-1:1
5.2 lnc-ABO-1:2