Transcript: lnc-ABO-33:8

Basic information

LNCipedia transcript ID: lnc-ABO-33:8 
LNCipedia gene ID: lnc-ABO-33
Location (hg19): chr9:136125807-136126767
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 761 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00016890; NONHSAT135295
Alternative gene names: XLOC_007880; linc-OBP2B


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 6.6287 non-coding 
CPAT coding probability 0.18% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ABO-33:8 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-OBP2B-1:1
3.1 lnc-OBP2B-1:1
4.0 lnc-OBP2B-1:1
4.1 lnc-OBP2B-1:1
5.0 lnc-OBP2B-1:1
5.1 lnc-ABO-2:8
5.2 lnc-ABO-33:8