Transcript: lnc-ABR-5:1

Basic information

LNCipedia transcript ID: lnc-ABR-5:1 
LNCipedia gene ID: lnc-ABR-5
Location (hg19): chr17:954315-1170453
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 2698 bp
Exons: 15
Sources: NONCODE v4
Alternative transcript names: NONHSAT144785
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -6.8135 non-coding 
CPAT coding probability 26.41% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ABR-5:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ABR-5:1
4.0 lnc-ABR-5:1
4.1 lnc-ABR-5:1
5.0 lnc-ABR-5:1
5.1 lnc-RPH3AL-30:4
5.2 lnc-ABR-5:1