Transcript: lnc-ABRAXAS1-2:1

Basic information

LNCipedia transcript ID: lnc-ABRAXAS1-2:1 
LNCipedia gene ID: lnc-ABRAXAS1-2
Location (hg19): chr4:84390177-84444501
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 770 bp
Exons: 6
Sources: NONCODE v4
Alternative transcript names: NONHSAT097221
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 1373.4497 coding 
CPAT coding probability 58.41% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-ABRAXAS1-2:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-FAM175A-2:1
4.0 lnc-FAM175A-2:1
4.1 lnc-FAM175A-2:1
5.0 lnc-FAM175A-2:1
5.1 lnc-LIN54-15:1
5.2 lnc-ABRAXAS1-2:1