Transcript: lnc-ACACA-2:1

Basic information

LNCipedia transcript ID: lnc-ACACA-2:1 
LNCipedia gene ID: lnc-ACACA-2
Ensembl Gene ID: ENSG00000273965
Ensembl Transcript ID: ENST00000620218
Location (hg19): chr17:35768023-35768681
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 293 bp
Exons: 2
Sources: NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: NONHSAT053272; ENST00000590364.1; ENST00000620218.1
Alternative gene names: ENSG00000267613.1; RP11-378E13.4; ENSG00000273965.1; AC243654.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -90.5927 non-coding 
CPAT coding probability 1.14% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ACACA-2:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ACACA-2:1
4.0 lnc-ACACA-2:1
4.1 lnc-ACACA-2:1
5.0 lnc-ACACA-2:1
5.1 lnc-SRCIN1-41:1
5.2 lnc-ACACA-2:1