Transcript: lnc-ACACB-1:4

Basic information

LNCipedia transcript ID: lnc-ACACB-1:4 
LNCipedia gene ID: lnc-ACACB-1
Ensembl Gene ID: ENSG00000256139
Ensembl Transcript ID: ENST00000541704
Location (hg19): chr12:109549023-109563399
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 910 bp
Exons: 3
Sources: Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000541704.2
Alternative gene names: ENSG00000256139.2; RP11-968O1.5; AC007637.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -19.2943 non-coding 
CPAT coding probability 33.15% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ACACB-1:4 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-UNG-1:4
4.0 lnc-ACACB-1:4
4.1 lnc-ACACB-1:4
5.0 lnc-ACACB-1:4
5.1 lnc-TCHP-19:3
5.2 lnc-ACACB-1:4