Transcript: lnc-ACBD3-3:1

Basic information

LNCipedia transcript ID: lnc-ACBD3-3:1 
LNCipedia gene ID: lnc-ACBD3-3
Location (hg19): chr1:226305367-226310582
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 5216 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000096397.1|ENCT00000038647.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -25.3051 non-coding 
CPAT coding probability 9.42% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ACBD3-3:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-ACBD3-3:1
5.0 lnc-ACBD3-3:1
5.1 lnc-LEFTY2-10:1
5.2 lnc-ACBD3-3:1