Transcript: lnc-ACD-1:2

Basic information

LNCipedia transcript ID: lnc-ACD-1:2 
LNCipedia gene ID: lnc-ACD-1
Ensembl Gene ID: ENSG00000237718
Ensembl Transcript ID: ENST00000388909
Location (hg19): chr16:67648284-67650049
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1326 bp
Exons: 2
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000388909.5
Alternative gene names: ENSG00000237718.2; AC009095.4; AC009095.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -6.337 non-coding 
CPAT coding probability 1.83% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ACD-1:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-ACD-1:2
4.1 lnc-ACD-1:2
5.0 lnc-ACD-1:2
5.1 lnc-PSMB10-9:1
5.2 lnc-ACD-1:2