Transcript: lnc-ACO2-1:2

Basic information

LNCipedia transcript ID: lnc-ACO2-1:2 
LNCipedia gene ID: lnc-ACO2-1
Location (hg19): chr22:41842949-41845347
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1968 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000057793.1|MICT00000234318.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -153.5041 non-coding 
CPAT coding probability 13.80% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ACO2-1:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-ACO2-1:2
5.0 lnc-ACO2-1:2
5.1 lnc-L3MBTL2-4:1
5.2 lnc-ACO2-1:2