Transcript: lnc-ACOD1-2:1

Basic information

LNCipedia transcript ID: lnc-ACOD1-2:1 
LNCipedia gene ID: lnc-ACOD1-2
Location (hg19): chr13:77470071-77525689
Strand: +
Class: sense-overlapping
Sequence Ontology term: sense_overlap_ncRNA
Transcript size: 601 bp
Exons: 5
Sources: Nielsen et al.,2014
Alternative transcript names: l_875_chr13:77470070-77525689_testes
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -18.9868 non-coding 
CPAT coding probability 1.29% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ACOD1-2:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-IRG1-2:1
4.0 lnc-IRG1-2:1
4.1 lnc-IRG1-2:1
5.0 lnc-IRG1-2:1
5.1 lnc-COL4A2-229:1
5.2 lnc-ACOD1-2:1