Transcript: lnc-ACOT9-2:1

Basic information

LNCipedia transcript ID: lnc-ACOT9-2:1 
LNCipedia gene ID: lnc-ACOT9-2
Location (hg19): chrX:23093708-23096495
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2459 bp
Exons: 2
Sources: Biogazelle lncRNA chip; Ensembl release 64 - Sep 2011
Alternative transcript names: ENST00000508288
Alternative gene names: ENSG00000249566; AC117517.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -16.7869 non-coding 
CPAT coding probability 50.98% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-ACOT9-2:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-ACOT9-2:1
3.1 lnc-ACOT9-2:1
4.0 lnc-ACOT9-2:1
4.1 lnc-ACOT9-2:1
5.0 lnc-ACOT9-2:1
5.1 lnc-PCSK1N-138:1
5.2 lnc-ACOT9-2:1