Transcript: lnc-ACOX3-1:2

Basic information

LNCipedia transcript ID: lnc-ACOX3-1:2 
LNCipedia gene ID: lnc-ACOX3-1
Ensembl Gene ID: ENSG00000251615
Ensembl Transcript ID: ENST00000505448
Location (hg19): chr4:8356817-8360065
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 3249 bp
Exons: 1
Sources: Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000505448.3
Alternative gene names: ENSG00000251615.3; RP11-774O3.3; AC104825.2; AC104825.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 13.8199 non-coding 
CPAT coding probability 99.16% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-ACOX3-1:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ACOX3-1:2
4.0 lnc-ACOX3-1:2
4.1 lnc-ACOX3-1:2
5.0 lnc-ACOX3-1:2
5.1 lnc-AFAP1-5:2
5.2 lnc-ACOX3-1:2