Transcript: lnc-ACOXL-1:2

Basic information

LNCipedia transcript ID: lnc-ACOXL-1:2 
LNCipedia gene ID: lnc-ACOXL-1
RefSeq ID: NR_135529
Location (hg19): chr2:111368703-111370272
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 828 bp
Exons: 2
Sources: Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_135529.1
Alternative gene names: LOC105373553


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -4.4403 non-coding 
CPAT coding probability 0.51% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ACOXL-1:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 lnc-SULT1C4-30:2
5.1 lnc-SULT1C4-30:2
5.2 lnc-ACOXL-1:2