Transcript: lnc-ACP1-7:2

Basic information

LNCipedia transcript ID: lnc-ACP1-7:2 
LNCipedia gene ID: lnc-ACP1-7
Location (hg19): chr2:495749-496627
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 559 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00003530; NONHSAT068557
Alternative gene names: XLOC_001306; linc-SNTG2-6


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 12.6499 non-coding 
CPAT coding probability 12.65% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ACP1-7:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-ACP1-6:2
3.1 lnc-ACP1-7:2
4.0 lnc-ACP1-7:2
4.1 lnc-ACP1-7:2
5.0 lnc-ACP1-7:2
5.1 lnc-SNX17-297:3
5.2 lnc-ACP1-7:2