Transcript: lnc-ACSL6-1:1

Basic information

LNCipedia transcript ID: lnc-ACSL6-1:1 
LNCipedia gene ID: lnc-ACSL6-1
Location (hg19): chr5:131528679-131529261
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 463 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4
Alternative transcript names: ENST00000506807.1; AC063976.6-001; OTTHUMT00000157396.1; NONHSAT103726
Alternative gene names: ENSG00000248721.1; AC063976.6; OTTHUMG00000074115.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -209.2251 non-coding 
CPAT coding probability 0.14% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ACSL6-1:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ACSL6-1:1
4.0 lnc-ACSL6-1:1
4.1 lnc-ACSL6-1:1
5.0 lnc-ACSL6-1:1
5.1 lnc-TIFAB-77:3
5.2 lnc-ACSL6-1:1