Transcript: lnc-ACTC1-1:2

Basic information

LNCipedia transcript ID: lnc-ACTC1-1:2 
LNCipedia gene ID: lnc-ACTC1-1
Location (hg19): chr15:35160323-35160538
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 216 bp
Exons: 1
Sources: Nielsen et al.,2014
Alternative transcript names: expReg_chr15_1403_-
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -0.5524 non-coding 
CPAT coding probability 2.74% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ACTC1-1:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ACTC1-1:2
4.0 lnc-ACTC1-1:2
4.1 lnc-ACTC1-1:2
5.0 lnc-ACTC1-1:2
5.1 lnc-ZNF770-5:2
5.2 lnc-ACTC1-1:2