Transcript: lnc-ACVR2A-1:2

Basic information

LNCipedia transcript ID: lnc-ACVR2A-1:2 
LNCipedia gene ID: lnc-ACVR2A-1
Ensembl Gene ID: ENSG00000227902
Ensembl Transcript ID: ENST00000436245
Location (hg19): chr2:147637477-147655786
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 355 bp
Exons: 5
Sources: NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: NONHSAT147115; ENST00000436245.2
Alternative gene names: ENSG00000227902.2; AC062032.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -9.7632 non-coding 
CPAT coding probability 0.28% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ACVR2A-1:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ACVR2A-1:2
4.0 lnc-ACVR2A-1:2
4.1 lnc-ACVR2A-1:2
5.0 lnc-ACVR2A-1:2
5.1 lnc-KCNJ3-58:2
5.2 lnc-ACVR2A-1:2